Welcome!
Pamela Ferretti
- University of Chicago, US
- Google Scholar
- ORCID
I’m a postdoctoral scholar in the Laboratory of Prof. Ran Blekhman at the University of Chicago, where I study microbial transmission in human and wild baboon populations through metagenomic and genomic approaches. I am interested in studying how commensal as well as pathogenic bacteria spread and persist in individuals that are in close social contact, like a mother with her infant or members of a family group. In particular, my current projects are focused on:
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Investigating strain transmission between maternal breast milk and her infant’s gut microbiome. The maternal milk often represents the sole source of nutrition for the baby for the first months of life, and yet very little is known about its microbial composition at the species and strain level. This study aims at studying the maternal milk microbiome in relation to the infant’s gut microbiome, and to better represent maternal milk in public repositoriese. This project is in collaboration with Prof. Cheryl Gale and Prof. Ellen Demerath.
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Strain transmission within a population of wild baboons that has been studied for over 50 years, as part of the Amboseli Baboon Research Project. This unique cohort represents the perfect scenario for studying how microbial populations change over time within a social group of hosts. This project is in collaboration with Prof. Elizabeth Archie, Prof. Jenny Tung and members of their research groups.
Most Recent News
An overview of all news can be found at here.Nov 2, 2024 | Great experience attending CSHL Microbiome! I presented our work on milk and infant gut microbiome, and the talented student Mary Chege presented our work on the eukaryotes in the gut of wild baboons. |
Mar 25, 2024 | Our preprint Fecal microbial load is a major determinant of gut microbiome variation and a confounder for disease associations led by Suguru Nishijima is out on bioRxiv! Check it out! |
Mar 17, 2024 | Excited to have been selected among the 12 participants for the 3 weeks-long workshop on Theory of Microbial Symbiosis at the Hawai`i Institute of Marine Biology |
Mar 1, 2024 | Postdoc spotlight article on The Microbiome Center newsletter |
Jan 29, 2024 | Our preprint on breastmilk and infant gut microbiome is now online on bioRxiv! |
Selected Publications
- Assembly, stability, and dynamics of the infant gut microbiome are linked to bacterial strains and functions in mother’s milkbioRxiv, 2024
- SPIRE: a Searchable, Planetary-scale mIcrobiome REsourceNucleic Acids Research, 2023
- C. difficile may be overdiagnosed in adults and is a prevalent commensal in infantseLife, 2023
- Meconium microbiome of very preterm infants across GermanyMSphere, 2022
- Diversity within species: interpreting strains in microbiomesNature Reviews Microbiology, 2020
- Mother-to-infant microbial transmission from different body sites shapes the developing infant gut microbiomeCell host & microbe, 2018